make_kmeans_gaps_plot: Make a plot of k-means gaps.
In bioinfocz/scdrake: A pipeline for droplet-based single-cell RNA-seq data secondary analysis implemented in the drake Make-like toolkit for R language
make_kmeans_gaps_plot R Documentation
Make a plot of k-means gaps.
Description
For more details see this
chapter in OSCA.
Usage
make_kmeans_gaps_plot(kmeans_gaps, best_k)
Arguments
kmeans_gaps
An output from cluster::clusGap().
best_k
A numeric scalar: best k for k-means calculated by cluster::maxSE().
Value
A ggplot object.
bioinfocz/scdrake documentation built on Jan. 29, 2024, 10:24 a.m.
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| make_kmeans_gaps_plot | R Documentation |
Make a plot of k-means gaps.
Description
For more details see this chapter in OSCA.
Usage
make_kmeans_gaps_plot(kmeans_gaps, best_k)
Arguments
kmeans_gaps |
An output from |
best_k |
A numeric scalar: best k for k-means calculated by |
Value
A ggplot object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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