plot_clustree: Plot clustering tree.

In bioinfocz/scdrake: A pipeline for droplet-based single-cell RNA-seq data secondary analysis implemented in the drake Make-like toolkit for R language

Plot clustering tree.

Description

clustree::clustree() is used under the hood.

Usage

plot_clustree(
  cluster_list,
  params,
  prefix,
  title = deparse(substitute(cluster_list)),
  edge_arrow = FALSE,
  highlight_core = TRUE,
  ...
)

Arguments

cluster_list	A named list of vectors.
params	A vector of clustering parameters (resolutions, ks) in the same order as cluster_list.
prefix, edge_arrow, highlight_core, ...	Passed to clustree::clustree().
title	A character scalar: plot title.

Value

A ggplot object.

bioinfocz/scdrake documentation built on Sept. 19, 2024, 4:43 p.m.