plot_hvg: Plot average expression vs. HVG metrics (total, bio, and...
In bioinfocz/scdrake: A pipeline for droplet-based single-cell RNA-seq data secondary analysis implemented in the drake Make-like toolkit for R language
plot_hvg R Documentation
Plot average expression vs. HVG metrics (total, bio, and technical variance) and highlight HVGs.
Description
Plot average expression vs. HVG metrics (total, bio, and technical variance) and highlight HVGs.
Usage
plot_hvg(sce, ...)
Arguments
sce
A SingleCellExperiment object with HVG metadata.
...
Currently not used.
Value
A ggplot2 object if hvg_metric is sctransform, otherwise a patchwork object.
bioinfocz/scdrake documentation built on Jan. 29, 2024, 10:24 a.m.
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| plot_hvg | R Documentation |
Plot average expression vs. HVG metrics (total, bio, and technical variance) and highlight HVGs.
Description
Plot average expression vs. HVG metrics (total, bio, and technical variance) and highlight HVGs.
Usage
plot_hvg(sce, ...)
Arguments
sce |
A |
... |
Currently not used. |
Value
A ggplot2 object if hvg_metric is sctransform, otherwise a patchwork object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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