prepare_marker_source_params: Prepare a 'tibble' with parameters for cluster marker tests.

In bioinfocz/scdrake: A pipeline for droplet-based single-cell RNA-seq data secondary analysis implemented in the drake Make-like toolkit for R language

Prepare a tibble with parameters for cluster marker tests.

Description

Prepare a tibble with parameters for cluster marker tests.

Usage

.prepare_marker_source_params(
  marker_source,
  marker_source_name,
  marker_default_params
)

.prepare_marker_sources_params(marker_sources, marker_default_params)

Arguments

marker_source	A named list.
marker_source_name	A character scalar: name of a marker source.
marker_default_params	A named list with default parameters (common and for tests). Obtained from CLUSTER_MARKERS_SOURCES_DEFAULTS or CONTRASTS_SOURCES_DEFAULTS.
marker_sources	A named list of named lists of marker sources.

Value

A named list (of named lists).

bioinfocz/scdrake documentation built on Sept. 19, 2024, 4:43 p.m.