import_DIANN: Import DIA-NN data

Description Usage Arguments Value

Description

Reads in DIA-NN report.tsv for processing.

Usage

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import_DIANN(
  file = NULL,
  use.shared.peptides = FALSE,
  data = NULL,
  as.data.table = F
)

Arguments

data

Advanced: Rather than specifying file, you can enter a data.frame preloaded with fread default parameters.

proteinGroups.file

Location of the proteinGroups.txt file.

evidence.file

Location of the evidence.txt file.

shared

Include shared peptides?

Value

A data.frame for input into bayesprot.


biospi/deamass documentation built on Nov. 25, 2021, 1:18 p.m.