subtree: Subtree

Description Usage Arguments Value Author(s) See Also Examples

Description

The function returns the subtree under the node inode

Usage

1
subtree(inode, name, nodematrix)

Arguments

inode

the root node of the subtree

name

the species names

nodematrix

the tree node matrix

Value

The function returns the tree string of the subtree.

Author(s)

Liang Liu lliu@harvard.edu

See Also

del.node

Examples

1
2
3
4
treestr<-"((((H:0.00402,C:0.00402):0.00304,G:0.00707):0.00929,O:0.01635):0.1,W:0.12);"
nodematrix<-read.tree.nodes(treestr)$nodes
spname<-read.tree.nodes(treestr)$names
subtree(7,spname,nodematrix)

bomeara/phybase documentation built on May 12, 2019, 11:35 p.m.