old_vignette/Untitled.R

In caravagn/revolver: REVOLVER - Repeated Evolution in Cancer

data('TRACERx_NEJM_2017_REVOLVER', package = 'evoverse.datasets')

x = remove_patients(x = TRACERx_NEJM_2017_REVOLVER, patientID = paste0("CRUK000", 1:9))


x = revolver::revolver_jackknife(TRACERx_NEJM_2017_REVOLVER, resamples = 20)
plot_jackknife_cluster_stability(x)
revolver::plot_jackknife_coclustering(x)
revolver::plot_jackknife_trajectories_stability(x)
save(TRACERx_NEJM_2017_REVOLVER, file='../tmp.RData')