ReadFrom10X_h5: ReadFrom10X_h5
In carter-allen/IRISFGM: Comprehensive Analysis of Gene Interactivity Networks Based on Single-Cell RNA-Seq
Description
Usage
Arguments
Value
Examples
Description
This function provide a method for reading in HDF5 file from 10X platform.
Usage
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ReadFrom10X_h5(input = NULL, use.names = TRUE, unique.features = TRUE)
ReadFrom10X_h5(input = NULL, use.names = TRUE, unique.features = TRUE)
## S4 method for signature 'IRISFGM'
ReadFrom10X_h5(input = NULL, use.names = TRUE, unique.features = TRUE)
Arguments
input
Input an HDF5 object
use.names
Use barcode, default is true
unique.features
use gene name, default is true
Value
The output from Read10X_h5
It will return a gene expression matrix.
Examples
1
## Not run: input_mat <- ReadFrom10X_h5(input= 'my.h5')
carter-allen/IRISFGM documentation built on Dec. 31, 2020, 9:54 p.m.
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Description Usage Arguments Value Examples
Description
This function provide a method for reading in HDF5 file from 10X platform.
Usage
1 2 3 4 5 6 | ReadFrom10X_h5(input = NULL, use.names = TRUE, unique.features = TRUE)
ReadFrom10X_h5(input = NULL, use.names = TRUE, unique.features = TRUE)
## S4 method for signature 'IRISFGM'
ReadFrom10X_h5(input = NULL, use.names = TRUE, unique.features = TRUE)
|
Arguments
input |
Input an HDF5 object |
use.names |
Use barcode, default is true |
unique.features |
use gene name, default is true |
Value
The output from Read10X_h5
It will return a gene expression matrix.
Examples
1 | ## Not run: input_mat <- ReadFrom10X_h5(input= 'my.h5')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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