PlotHeatmap: PlotHeatmap

In carter-allen/IRISFGM: Comprehensive Analysis of Gene Interactivity Networks Based on Single-Cell RNA-Seq

Description

PlotHeatmap

plot heatmap based on bicluster

Usage

PlotHeatmap(object, ...)

.plotHeatmap(
  object = object,
  N.bicluster = c(1, 5),
  show.overlap = F,
  seed = 123,
  show.annotation = F,
  show.clusters = F
)

## S4 method for signature 'IRISFGM'
PlotHeatmap(
  object = object,
  N.bicluster = c(1, 5),
  show.overlap = F,
  seed = 123,
  show.annotation = F,
  show.clusters = F
)

Arguments

object	Input IRISFGM object
...	other arguments passed to methods
N.bicluster	Number of biclusters.
show.overlap	Parameter (logic) indicates whether the figure shows the overlap part between two selected biclusters.
seed	Set seeds for reproducibility.
show.annotation	Parameter (logic) indicates whether to show annotation (biclusters number and cell cluster labels).
show.clusters	Parameter (logic) indicates whether to show the cell cluster label.

carter-allen/IRISFGM documentation built on Dec. 31, 2020, 9:54 p.m.