selectQaColumns: select fastqFileName, fastqFileNumber, and a pre-determined...
In cmatKhan/brentlabRnaSeqTools: A Collection of Functions to Interact with the Brentlab RNASeq Database
Description
Usage
Arguments
Note
View source: R/QualityAssessmentFunctions.R
Description
select fastqFileName, fastqFileNumber, and a pre-determined set of QC columns from a metadata df
Usage
1
selectQaColumns(metadata)
Arguments
metadata
a metadata df with at least the columns listed in the select statement (see source code – notably, must include interquartile range). Column names will be cast to uppper and returned as uppers
Note
the column names for the metadata will be cast to upper and returned in upper
must include Interquartile range. Think about removing this – user could merge with IQR df after selecting these cols
cmatKhan/brentlabRnaSeqTools documentation built on Nov. 17, 2021, 5:47 a.m.
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Description Usage Arguments Note
View source: R/QualityAssessmentFunctions.R
Description
select fastqFileName, fastqFileNumber, and a pre-determined set of QC columns from a metadata df
Usage
1 | selectQaColumns(metadata)
|
Arguments
metadata |
a metadata df with at least the columns listed in the select statement (see source code – notably, must include interquartile range). Column names will be cast to uppper and returned as uppers |
Note
the column names for the metadata will be cast to upper and returned in upper
must include Interquartile range. Think about removing this – user could merge with IQR df after selecting these cols
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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