hmmbuild: HMM build
In computational-genomics-lab/motifFUN: Searching user-defined motif along with functional annotation filtering criteria
Description
Usage
Arguments
Value
Description
This function is build model by using MAFFT alignment sequence file
Usage
1
Arguments
hmm_path
complete path of HMMER
seed
The seed to used with HMMER commands. Set this to get the same output each time.
mafft.out.name
mafft alignment filename.
Value
Resulted output file name
computational-genomics-lab/motifFUN documentation built on June 4, 2019, 7:52 a.m.
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Description Usage Arguments Value
Description
This function is build model by using MAFFT alignment sequence file
Usage
1 |
Arguments
hmm_path |
complete path of HMMER |
seed |
The seed to used with HMMER commands. Set this to get the same output each time. |
mafft.out.name |
mafft alignment filename. |
Value
Resulted output file name
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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