Description Usage Arguments Value Author(s) References
View source: R/GetAAindexStats.R
For a peptide sequence, obtain properties associated to its amino acid content
1 | GetAAindexStats(AAfreq, AAindex_Selection)
|
AAfreq |
The relative frequency of amino acids in the peptide sequence obtained from function |
Vector |
of accession numbers to select a subset of the 544 amino acid indices |
A data.frame containing the desired amino acid index stats (columns) for each sequence submitted (rows)
Carlus Deneke
Adapted from aaindex in seqinr
Please cite the following references when making use of the database:
Kawashima, S. and Kanehisa, M. (2000) AAindex: amino acid index database. Nucleic Acids Res., 28:374.
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