The fcoex package implements an easy-to use interface to co-expression analysis based on the FCBF (Fast Correlation-Based Filter) algorithm. it was implemented especifically to deal with single-cell data. The modules found can be used to redefine cell populations, unrevel novel gene associations and predict gene function by guilt-by-association. The package structure is adapted from the CEMiTool package, relying on visualizations and code designed and written by CEMiTool's authors.
Package details |
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Bioconductor views | GeneExpression GraphAndNetwork ImmunoOncology Network NetworkEnrichment Pathways RNASeq SingleCell Transcriptomics mRNAMicroarray |
Maintainer | |
License | GPL-3 |
Version | 1.7.2 |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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