new_fcoex: Create a fcoex object

In csbl-usp/fcoex: FCBF-based Co-Expression Networks for Single Cells

Description

Create a fcoex object

Usage

new_fcoex(expression = data.frame(), target = vector())

Arguments

expression	Normalized gene expression table from single-cells data.frame.
target	Original target classes for the cells (factor).

Value

Object of class fcoex

Examples

# Create new fcoex object
library(SingleCellExperiment)
data("mini_pbmc3k")
targets <- colData(mini_pbmc3k)$clusters
exprs <- as.data.frame(assay(mini_pbmc3k, "logcounts"))
fc <- new_fcoex(exprs, targets)

csbl-usp/fcoex documentation built on Sept. 15, 2021, 7:42 a.m.