API for data2intelligence/SpaCE
Spatial Cellular Estimator for Tumors
| Global functions | |
|---|---|
| SpaCET-class | Man page |
| SpaCET.CCI.LRNetworkScore | Man page Source code |
| SpaCET.CCI.cellTypePair | Man page Source code |
| SpaCET.CCI.colocalization | Man page Source code |
| SpaCET.GeneSetScore | Man page Source code |
| SpaCET.combine.interface | Man page Source code |
| SpaCET.deconvolution | Man page Source code |
| SpaCET.deconvolution.malignant | Man page Source code |
| SpaCET.deconvolution.malignant.customized.scRNAseq | Man page Source code |
| SpaCET.deconvolution.matched.scRNAseq | Man page Source code |
| SpaCET.distance.to.interface | Man page Source code |
| SpaCET.identify.interface | Man page Source code |
| SpaCET.quality.control | Man page Source code |
| SpaCET.visualize.cellTypePair | Man page Source code |
| SpaCET.visualize.colocalization | Man page Source code |
| SpaCET.visualize.spatialFeature | Man page Source code |
| SpatialDeconv | Source code |
| addTo.Seurat | Man page Source code |
| convert.Seurat | Man page Source code |
| corMat | Source code |
| create.SpaCET.object | Man page Source code |
| create.SpaCET.object.10X | Man page Source code |
| generateRef | Source code |
| inferMal_cor | Source code |
| read.gmt | Man page Source code |
| rm_duplicates | Source code |
| visualSpatial | Source code |
| write.gmt | Man page Source code |
