SpaCET.deconvolution: Deconvolve tumor ST data set
In data2intelligence/SpaCE: Spatial Cellular Estimator for Tumors
View source: R/deconvolution.R
SpaCET.deconvolution R Documentation
Deconvolve tumor ST data set
Description
Estimate the cell fraction of cell lineages and sub lineages.
Usage
SpaCET.deconvolution(SpaCET_obj, cancerType, coreNo = 8)
Arguments
SpaCET_obj
An SpaCET object.
cancerType
Cancer type of the current tumor ST dataset.
coreNo
Core number in parallel computation.
Value
An SpaCET object.
Examples
SpaCET_obj <- SpaCET.deconvolution(SpaCET_obj, cancerType="BRCA", coreNo=8)
data2intelligence/SpaCE documentation built on April 6, 2024, 2:32 a.m.
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View source: R/deconvolution.R
| SpaCET.deconvolution | R Documentation |
Deconvolve tumor ST data set
Description
Estimate the cell fraction of cell lineages and sub lineages.
Usage
SpaCET.deconvolution(SpaCET_obj, cancerType, coreNo = 8)
Arguments
SpaCET_obj |
An SpaCET object. |
cancerType |
Cancer type of the current tumor ST dataset. |
coreNo |
Core number in parallel computation. |
Value
An SpaCET object.
Examples
SpaCET_obj <- SpaCET.deconvolution(SpaCET_obj, cancerType="BRCA", coreNo=8)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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