SpaCET.combine.interface: Combine interaction spots to interface
In data2intelligence/SpaCE: Spatial Cellular Estimator for Tumors
SpaCET.combine.interface R Documentation
Combine interaction spots to interface
Description
Demonstrate the spatial position of interaction spots at the tumor microenvironment.
Usage
SpaCET.combine.interface(SpaCET_obj, cellTypePair)
Arguments
SpaCET_obj
An SpaCET object.
cellTypePair
A pair of cell types.
Value
An SpaCET object.
Examples
SpaCET_obj <- SpaCET.combine.interface(SpaCET_obj,cellTypePair=c("CAF", "Macrophage M2"))
SpaCET.visualize.spatialFeature(SpaCET_obj, spatialType = "Interface", spatialFeature = "Interaction")
data2intelligence/SpaCE documentation built on April 6, 2024, 2:32 a.m.
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| SpaCET.combine.interface | R Documentation |
Combine interaction spots to interface
Description
Demonstrate the spatial position of interaction spots at the tumor microenvironment.
Usage
SpaCET.combine.interface(SpaCET_obj, cellTypePair)
Arguments
SpaCET_obj |
An SpaCET object. |
cellTypePair |
A pair of cell types. |
Value
An SpaCET object.
Examples
SpaCET_obj <- SpaCET.combine.interface(SpaCET_obj,cellTypePair=c("CAF", "Macrophage M2"))
SpaCET.visualize.spatialFeature(SpaCET_obj, spatialType = "Interface", spatialFeature = "Interaction")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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