SpaCET.CCI.cellTypePair: Ligand-Receptor analysis for a co-localized cell-type pair
In data2intelligence/SpaCE: Spatial Cellular Estimator for Tumors
SpaCET.CCI.cellTypePair R Documentation
Ligand-Receptor analysis for a co-localized cell-type pair
Description
Test the co-expression of ligands and receptors within the same ST spot for the co-localized cell-type pairs.
Usage
SpaCET.CCI.cellTypePair(SpaCET_obj, cellTypePair)
Arguments
SpaCET_obj
An SpaCET object.
cellTypePair
A pair of cell-types.
Value
An SpaCET object.
Examples
SpaCET_obj <- SpaCET.CCI.cellTypePair(SpaCET_obj, cellTypePair=c("CAF","Macrophage M2"))
data2intelligence/SpaCE documentation built on April 6, 2024, 2:32 a.m.
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| SpaCET.CCI.cellTypePair | R Documentation |
Ligand-Receptor analysis for a co-localized cell-type pair
Description
Test the co-expression of ligands and receptors within the same ST spot for the co-localized cell-type pairs.
Usage
SpaCET.CCI.cellTypePair(SpaCET_obj, cellTypePair)
Arguments
SpaCET_obj |
An SpaCET object. |
cellTypePair |
A pair of cell-types. |
Value
An SpaCET object.
Examples
SpaCET_obj <- SpaCET.CCI.cellTypePair(SpaCET_obj, cellTypePair=c("CAF","Macrophage M2"))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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