API for databio/GenomicDistributions
GenomicDistributions: fast analysis of genomic intervals with Bioconductor
| Global functions | |
|---|---|
| .getDataFromPkg | Source code |
| .requireAndReturn | Man page Source code |
| .validateInputs | Man page Source code |
| BSdtToGRanges | Man page Source code |
| DTNearest | Source code |
| GenomicDistributions | Man page |
| TSS_hg19 | Man page |
| binBSGenome | Man page Source code |
| binChroms | Man page Source code |
| binRegion | Man page Source code |
| calcChromBins | Man page Source code |
| calcChromBinsRef | Man page Source code |
| calcChromBinsRefSlow | Man page Source code |
| calcCumulativePartitions | Man page Source code |
| calcCumulativePartitionsRef | Man page Source code |
| calcDinuclFreq | Man page Source code |
| calcDinuclFreqRef | Man page Source code |
| calcExpectedPartitions | Man page Source code |
| calcExpectedPartitionsRef | Man page Source code |
| calcFeatureDist | Man page Source code |
| calcFeatureDistBioc | Source code |
| calcFeatureDistRefTSS | Man page Source code |
| calcGCContent | Man page Source code |
| calcGCContentRef | Man page Source code |
| calcNearestNeighbors | Man page Source code |
| calcNeighborDist | Man page Source code |
| calcOLCount | Source code |
| calcPartitions | Man page Source code |
| calcPartitionsRef | Man page Source code |
| calcSummarySignal | Man page Source code |
| calcWidth | Man page Source code |
| cellTypeMetadata | Man page |
| chromSizes_hg19 | Man page |
| dtToGr | Man page Source code |
| dtToGrInternal | Man page Source code |
| exampleOpenSignalMatrix_hg19 | Man page |
| geneModels_hg19 | Man page |
| genomeLabel | Source code |
| genomePartitionList | Man page Source code |
| getChromSizes | Man page Source code |
| getChromSizesFromFasta | Man page Source code |
| getGeneModels | Man page Source code |
| getGeneModelsFromGTF | Man page Source code |
| getGenomeBins | Man page |
| getReferenceData | Man page Source code |
| getTSSs | Source code |
| getTssFromGTF | Man page Source code |
| grToDt | Man page Source code |
| labelCuts | Man page Source code |
| loadBSgenome | Man page Source code |
| loadEnsDb | Man page Source code |
| neighbordt | Man page Source code |
| nlist | Man page Source code |
| plotChromBins | Man page |
| plotCumulativePartitions | Man page Source code |
| plotDinuclFreq | Man page Source code |
| plotExpectedPartitions | Man page |
| plotFeatureDist | Man page Source code |
| plotGCContent | Man page Source code |
| plotNeighborDist | Man page Source code |
| plotPartitions | Man page |
| plotQTHist | Man page Source code |
| plotSummarySignal | Man page Source code |
| retrieveFile | Man page Source code |
| setB_100 | Man page |
| setLabels | Source code |
| signalMatrixToOpenRegions | Source code |
| splitDataTable | Man page Source code |
| theme_blank_facet_label | Man page Source code |
| vistaEnhancers | Man page |
