databio/GenomicDistributions: Produces Summaries and Plots of Features Distributed Across Genomes

If you have a set of genomic ranges, this package can help you with some simple visualizations. It produces several kinds of plots, for example: Chromosome distribution plots, which visualize how your regions are distributed over chromosomes; feature distance distribution plots, which visualizes how your regions are distributed relative to a feature of interest, like Transcription Start Sites (TSSs); genomic partition plots, which visualize how your regions overlap given genomic features such as promoters, introns, exons, or intergenic regions.

Getting started

Package details

Maintainer
LicenseBSD_2_clause + file LICENSE
Version0.5
URL http://code.databio.org/GenomicDistributions
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("databio/GenomicDistributions")
databio/GenomicDistributions documentation built on July 7, 2018, 7:47 a.m.