getGenomeBins: Returns bins used in 'calcChromBins' function Given a named...
In databio/GenomicDistributions: GenomicDistributions: fast analysis of genomic intervals with Bioconductor
getGenomeBins R Documentation
Returns bins used in 'calcChromBins' function
Given a named vector of chromosome sizes, the function returns
GRangesList object with bins for each chromosome.
Description
Returns bins used in 'calcChromBins' function
Given a named vector of chromosome sizes, the function returns
GRangesList object with bins for each chromosome.
Usage
getGenomeBins(chromSizes, binCount = 10000)
Arguments
chromSizes
a named list of size (length) for each chromosome.
binCount
number of bins (total; *not* per chromosome),
defaults to 10,000
Value
A GRangesList object with bins that separate chromosomes
into equal parts.
Examples
chromSizes = getChromSizes("hg19")
chromBins = getGenomeBins(chromSizes)
databio/GenomicDistributions documentation built on April 30, 2024, 4:34 a.m.
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| getGenomeBins | R Documentation |
Returns bins used in 'calcChromBins' function Given a named vector of chromosome sizes, the function returns GRangesList object with bins for each chromosome.
Description
Returns bins used in 'calcChromBins' function Given a named vector of chromosome sizes, the function returns GRangesList object with bins for each chromosome.
Usage
getGenomeBins(chromSizes, binCount = 10000)
Arguments
chromSizes |
a named list of size (length) for each chromosome. |
binCount |
number of bins (total; *not* per chromosome), defaults to 10,000 |
Value
A GRangesList object with bins that separate chromosomes into equal parts.
Examples
chromSizes = getChromSizes("hg19")
chromBins = getGenomeBins(chromSizes)
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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