GenomicDistributions-package: Produces summaries and plots of features distributed across...

In databio/GenomicDistributions: GenomicDistributions: fast analysis of genomic intervals with Bioconductor

Produces summaries and plots of features distributed across genomes

Description

If you have a set of genomic ranges, the GenomicDistributions R package can help you with some simple visualizations. Currently, it can produce two kinds of plots: First, the chromosome distribution plot, which visualizes how your regions are distributed over chromosomes; and second, the feature distribution plot, which visualizes how your regions are distributed relative to a feature of interest, like Transcription Start Sites (TSSs).

Author(s)

Maintainer: Kristyna Kupkova [e-mail]

Authors:

• Jose Verdezoto

• Tessa Danehy

• John Lawson

• Jose Verdezoto

• Michal Stolarczyk

• Jason Smith

• Bingjie Xue

• Sophia Rogers

• John Stubbs

• Nathan C. Sheffield [e-mail]

See Also

Useful links:

• http://code.databio.org/GenomicDistributions

• Report bugs at http://github.com/databio/GenomicDistributions

databio/GenomicDistributions documentation built on July 5, 2025, 2:34 a.m.