export.gsea.rnk.RankProd: Take the results from a RankProd analysis, and produce a rnk...
In drmjc/microarrays: A collection of microarray and genomic helper code.
Description
Usage
Arguments
Value
Author(s)
Description
The score is the inverse of the RP score, multiplied by
100 or -100 for the up and down-regulated genes
respectively. This typically produces scores in 3 to -3
range
Usage
1
2
export.gsea.rnk.RankProd(rp, names = NULL, file,
method = c("inv.log", "inverse"))
Arguments
rp
a rankprod result object.
names
a character vector of probe names, or if
NULL, the rownames of x will be used, else error
file
the output rnk file name
method
one of ‘inv.log’, or
‘inverse’. see
RankProd.signed.score
Value
write out a rnk file, and invisibly return the rp score.
Author(s)
Mark Cowley, 2009-01-09
drmjc/microarrays documentation built on May 15, 2019, 2:26 p.m.
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Description Usage Arguments Value Author(s)
Description
The score is the inverse of the RP score, multiplied by 100 or -100 for the up and down-regulated genes respectively. This typically produces scores in 3 to -3 range
Usage
1 2 | export.gsea.rnk.RankProd(rp, names = NULL, file,
method = c("inv.log", "inverse"))
|
Arguments
rp |
a rankprod result object. |
names |
a character vector of probe names, or if
|
file |
the output rnk file name |
method |
one of ‘inv.log’, or
‘inverse’. see
|
Value
write out a rnk file, and invisibly return the rp score.
Author(s)
Mark Cowley, 2009-01-09
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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