summarise.dabg: Sumarise an Affymetrix DABG file The Detected Above...
In drmjc/microarrays: A collection of microarray and genomic helper code.
Description
Usage
Arguments
Author(s)
Examples
Description
Sumarise an Affymetrix DABG file The Detected Above
Background method by Affymetrix generates a P-Value for
the probability of each probeset being expressed above
the matched control probes. Import an Affymetrix DABG
results table, and: boxplot of these p-values for each
array summary table of how many probesets pass certain
P-value thresholds. see also
plot_dabg_vs_rma
Usage
1
Arguments
file
the path to an Affymetrix DABG result file.
Author(s)
Mark Cowley, 17/1/08
Examples
1
2
3
4
## Not run:
dabg <- summarise.dabg("./dabg.summary.txt")
## End(Not run)
drmjc/microarrays documentation built on May 15, 2019, 2:26 p.m.
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Description Usage Arguments Author(s) Examples
Description
Sumarise an Affymetrix DABG file The Detected Above
Background method by Affymetrix generates a P-Value for
the probability of each probeset being expressed above
the matched control probes. Import an Affymetrix DABG
results table, and: boxplot of these p-values for each
array summary table of how many probesets pass certain
P-value thresholds. see also
plot_dabg_vs_rma
Usage
1 |
Arguments
file |
the path to an Affymetrix DABG result file. |
Author(s)
Mark Cowley, 17/1/08
Examples
1 2 3 4 | ## Not run:
dabg <- summarise.dabg("./dabg.summary.txt")
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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