DosageOfAllCombos: Get the Dosage for All Combinations of Controls

In dsherma7/PolyploidDosageCalling: Calls the Dosage From Tetraploid qPCR Data (CT/RQ Values)

Description

Uses all possible subsets of control values in order to generate a calibration delta CT value.

Usage

DosageOfAllCombos(AllData, all.control.combos = NULL, Results.Only = FALSE,
  Controls = NULL, min = 1, max = nrow(Controls))

Arguments

AllData	A two-dimensional list seperated first by Jobs, then by Plates, containing the data for each experiment.
all.control.combos	All possible combinations of the control variables.
Results.Only	FALSE means that the AllData is actually a three-dimensonal list with the third dimension being each sheet in the data sets. If AllData only contains the "Results' section then set this to TRUE.
Controls	data.frame containing the Control values for this experiment. Must have column names of Actual.Name, Name, Dosage; where Actual.Name is what is found exactly in the data sets, Name is the desired output name (often the same as Actual.Name), and Dosage is the Dosage for each control.
min	The smallest subset of controls to use for the calibration sample.
max	The largest subset of controls to use for the calibration sample. Usually this is the total number of controls.

dsherma7/PolyploidDosageCalling documentation built on May 23, 2019, 6:06 p.m.