GetConf: Measures the Confidence in Prediction

In dsherma7/PolyploidDosageCalling: Calls the Dosage From Tetraploid qPCR Data (CT/RQ Values)

Description

Used to measure the confidence of each dosage call following standard multivariate normal confidence intervals.

Usage

GetConf(fitAllClust, limit, index = 1:2, lbl.rng = 0:2)

Arguments

fitAllClust	A 2 dimensional list containing a data frame (named df), with the paramater values for each sample along with the predicted cluster, and the ClustMeans matrix, an nClust x p numeric Matrix of the mean values of each paramater for each cluster.
limit	The number of standard deviations from the mean that would warrant being called an outlier.
index	Which parameters to be used for measuring confidence. Default assumes only 2 features, but often this number is 1:p.

dsherma7/PolyploidDosageCalling documentation built on May 23, 2019, 6:06 p.m.