CombineDosages: Combine Each of the Models

In dsherma7/PolyploidDosageCalling: Calls the Dosage From Tetraploid qPCR Data (CT/RQ Values)

Description

Combine each of the different models into a single dataframe. You could add more models and combine them here as desired.

Usage

CombineDosages(Dosages, Manual, SemiSuper, Target, Jobs = names(Dirs),
  Plates = lapply(lapply(seq(length(Dirs)), function(x) {    
  unlist(gsub(paste0(".xls|.xlsx|.txt|.csv", paste0(names(Dirs)[x], "-")), "",
  Dirs[[x]])) }), as.character))

Arguments

Dosages	The output from GetDosages containing the SVM, Multinomial, and QS dosage predictions.
Manual	The Manual calling simulated model's output. See ManualCall.Trials for more information
SemiSuper	The semi-supervised clustering model's output. See MyClustering for more information
Jobs	The names of each of the folders for each job.
Plates	Names of the individual excel datasets within each Job. Usually <Plate Name>.xlsx

dsherma7/PolyploidDosageCalling documentation built on May 23, 2019, 6:06 p.m.