API for edward130603/BayesSpace
Clustering and Resolution Enhancement of Spatial Transcriptomes
| Global functions | |
|---|---|
| .adjust_hex_centers | Man page Source code |
| .bsData | Man page Source code |
| .clean_chain | Man page Source code |
| .compute_interspot_distances | Man page Source code |
| .dirichlet_enhance | Source code |
| .enhance_features | Source code |
| .extract_indices | Man page Source code |
| .find_neighbors | Man page Source code |
| .flatten_matrix_list | Man page Source code |
| .flip_axis | Man page Source code |
| .infer_param_dims | Man page Source code |
| .init_cluster | Man page Source code |
| .list2vec | Man page Source code |
| .lm_enhance | Source code |
| .make_hex_spots | Man page Source code |
| .make_index_names | Man page Source code |
| .make_spot_vertices | Man page Source code |
| .make_square_spots | Man page Source code |
| .make_square_vec | Source code |
| .make_subspot_coldata | Man page Source code |
| .make_subspots | Man page Source code |
| .make_triangle_subspots | Man page Source code |
| .make_vertices | Man page Source code |
| .prepare_inputs | Man page Source code |
| .read_chain | Man page Source code |
| .read_scale_factors | Source code |
| .read_spot_pos | Man page Source code |
| .select_spot_positions | Man page Source code |
| .select_subspot_positions | Man page Source code |
| .write_chain | Source code |
| .xgboost_enhance | Source code |
| BayesSpace | Man page |
| BayesSpace-package | Man page |
| Mode | Man page Source code |
| adjustClusterLabels | Man page |
| cluster | Man page Source code |
| clusterPlot | Man page Source code |
| compute_corr | Source code |
| coreTune | Man page Source code |
| counts2h5 | Man page Source code |
| deconvolve | Man page Source code |
| enhanceFeatures | Man page Source code |
| exampleSCE | Man page Source code |
| featurePlot | Man page Source code |
| find_neighbors | Man page Source code |
| getRDS | Man page Source code |
| iterate | Source code |
| iterate_deconv | Source code |
| iterate_t | Source code |
| iterate_t_vvv | Source code |
| iterate_vvv | Source code |
| map_subspot2ref | Source code |
| mcmcChain | Man page Source code |
| paraLapply | Man page Source code |
| parallelize | Man page |
| qPlot | Man page Source code |
| qTune | Man page Source code |
| read10Xh5 | Man page Source code |
| readVisium | Man page Source code |
| removeChain | Man page Source code |
| spatialCluster | Man page Source code |
| spatialEnhance | Man page Source code |
| spatialPlot | Man page |
| spatialPreprocess | Man page Source code |
