getProp: Get proportions from a SegmentedCells, SingleCellExperiment,...
In ellispatrick/spicyR: Spatial analysis of in situ cytometry data
getProp R Documentation
Get proportions from a SegmentedCells, SingleCellExperiment,
SpatialExperiment or data.frame.
Description
Get proportions from a SegmentedCells, SingleCellExperiment,
SpatialExperiment or data.frame.
Usage
getProp(cells, feature = "cellType", imageID = "imageID")
Arguments
cells
SegmentedCells, SingleCellExperiment, SpatialExperiment or data.frame
feature
The feature of interest
imageID
The imageID's
Value
Proportions
Examples
data("diabetesData")
prop <- getProp(diabetesData)
ellispatrick/spicyR documentation built on April 22, 2024, 12:24 p.m.
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| getProp | R Documentation |
Get proportions from a SegmentedCells, SingleCellExperiment, SpatialExperiment or data.frame.
Description
Get proportions from a SegmentedCells, SingleCellExperiment, SpatialExperiment or data.frame.
Usage
getProp(cells, feature = "cellType", imageID = "imageID")
Arguments
cells |
SegmentedCells, SingleCellExperiment, SpatialExperiment or data.frame |
feature |
The feature of interest |
imageID |
The imageID's |
Value
Proportions
Examples
data("diabetesData")
prop <- getProp(diabetesData)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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