Files in erflynn/exprsex
Rank-Based Sex Labeling of Microarray Expression Data
DESCRIPTION
NAMESPACE
R/checkInputFormat.R
R/data.R
R/exprsex.R
R/getProbaScore.R
R/gplMap.R
R/gplMapDetectGeneID.R
R/gplMapSetupRef.R
R/prepInput.R
R/runSexLab.R
R/sysdata.rda
README.md
data/default_fit.rda
data/fit_all_train.rda
data/sex_lab_genes.rda
man/dot-checkExprMatFormat.Rd
man/dot-checkFitFormat.Rd
man/dot-checkGeneFormat.Rd
man/dot-checkMatching.Rd
man/dot-checkProbeMapping.Rd
man/dot-checkSexLabFormat.Rd
man/dot-checkTrainInputFormat.Rd
man/dot-check_entrez_overlap.Rd
man/dot-clean_mapping.Rd
man/dot-convertGenes.Rd
man/dot-detect_ensembl_cols.Rd
man/dot-detect_entrez_ids_name.Rd
man/dot-detect_genbank_cols.Rd
man/dot-detect_genbank_cols_name.Rd
man/dot-detect_hgnc_cols.Rd
man/dot-detect_int_cols.Rd
man/dot-detect_refseq_cols.Rd
man/dot-detect_unigene_cols.Rd
man/dot-expDataToRanks.Rd
man/dot-extract_biomart_ref.Rd
man/dot-extract_entrez.Rd
man/dot-filterGenesByVar.Rd
man/dot-find_col_loc.Rd
man/dot-find_entrez_w_in_block.Rd
man/dot-geomMeanAcrossGenes.Rd
man/dot-geomMeanScore.Rd
man/dot-get_genbank.Rd
man/dot-get_ref_data.Rd
man/dot-get_unigene.Rd
man/dot-get_xy_genes.Rd
man/dot-load_ref.Rd
man/dot-map_from_ensembl.Rd
man/dot-map_from_genbank.Rd
man/dot-map_from_hgnc.Rd
man/dot-map_from_refseq.Rd
man/dot-map_from_unigene.Rd
man/dot-my_assert.Rd
man/dot-parse_multi_col.Rd
man/dot-predDf.Rd
man/dot-reform_entrez_df.Rd
man/dot-reorderGeneMat.Rd
man/exprsex.Rd
man/generate_all_ref.Rd
man/getConsensusGenes.Rd
man/getPrepGSE.Rd
man/map_mult_gpl.Rd
man/parse_entrez_from_gpl.Rd
man/predProba.Rd
man/predSexLab.Rd
man/prepFromExpr.Rd
man/reorderRank.Rd
man/runSexLab.Rd
man/sex_lab_genes.Rd
man/trainProba.Rd
man/trainSexLab.Rd
tests/testthat.R
tests/testthat/test-detect_gene_ids.R
tests/testthat/test-map_ids.R
tests/testthat/test-parse_gene_ids.R
vignettes/gpl-mapping-vignette.Rmd
vignettes/sex-label-vignette.Rmd
vignettes/sex-label-vignette.html
