dot-geomMeanAcrossGenes: Helper function to calculate geometric mean of a set of genes...
In erflynn/exprsex: Rank-Based Sex Labeling of Microarray Expression Data
Description
Usage
Arguments
Value
Description
Computes the geometric mean of the expression of a particular set of genes for every sample
(column) in a matrix. NAs are ignored during this calculation. The result is a vector of
geometric means, each corresponding to one sample (column) in the original matrix.
Usage
1
.geomMeanAcrossGenes(expr_mat, genes)
Arguments
expr_mat
expression dataset, rows are genes, columns are samples
genes
list of genes to calculate the geometric mean of
Value
a vector of geometric means
erflynn/exprsex documentation built on Feb. 23, 2020, 2:34 a.m.
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Description Usage Arguments Value
Description
Computes the geometric mean of the expression of a particular set of genes for every sample (column) in a matrix. NAs are ignored during this calculation. The result is a vector of geometric means, each corresponding to one sample (column) in the original matrix.
Usage
1 | .geomMeanAcrossGenes(expr_mat, genes)
|
Arguments
expr_mat |
expression dataset, rows are genes, columns are samples |
genes |
list of genes to calculate the geometric mean of |
Value
a vector of geometric means
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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