dot-load_ref: Load the desired reference data mapping table. The reference...
In erflynn/exprsex: Rank-Based Sex Labeling of Microarray Expression Data
Description
Usage
Arguments
Value
Description
Load the desired reference data mapping table.
The reference tables are used later for mapping gpl data to entrez ids.
This first checks if the mapping exists in the ref_dir and then if not,
calls a helper function to extract it.
Usage
1
Arguments
organism
the organism to grab data for: rat, mouse, or human
type
type of data desired - one of "ensembl", "refseq", "hgnc", "unigene", "genbank", or "entrezids"
ref_dir
option to set reference directory (defaults to tempdir)
save_dat
whether to save the data in the reference directory, defaults to TRUE
Value
the desired mapping data
erflynn/exprsex documentation built on Feb. 23, 2020, 2:34 a.m.
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Description Usage Arguments Value
Description
Load the desired reference data mapping table. The reference tables are used later for mapping gpl data to entrez ids. This first checks if the mapping exists in the ref_dir and then if not, calls a helper function to extract it.
Usage
1 |
Arguments
organism |
the organism to grab data for: rat, mouse, or human |
type |
type of data desired - one of "ensembl", "refseq", "hgnc", "unigene", "genbank", or "entrezids" |
ref_dir |
option to set reference directory (defaults to tempdir) |
save_dat |
whether to save the data in the reference directory, defaults to TRUE |
Value
the desired mapping data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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