plotDimHighlight: Dimensionality Reduction Plot With Highlighted Clusters

In farrellja/URD: URD

Description

Produces a plot with plotDim with cluster colors dimmed, and a single cluster highlighted in a bright color (by default, red).

Usage

plotDimHighlight(object, clustering, cluster, highlight.color = "red", ...)

Arguments

object	An URD object
clustering	(Character) Name of column in @group.ids that identifies the clustering to pull from
cluster	(Character vector) A cluster name that you want to highlight.
highlight.color	(Character) A color name to use for the highlighted cluster.
...	Additional parameters to pass to plotDim

Value

A ggplot2 object

farrellja/URD documentation built on June 17, 2020, 4:48 a.m.