treeLayoutCells: Add cells to tree layout
In farrellja/URD: URD
Description
Usage
Arguments
Value
Description
This function is called automatically by buildTree.
Usage
1
treeLayoutCells(object, pseudotime, jitter = 0.15, jitter.push = 0.05)
Arguments
object
An URD object
pseudotime
(Character) Pseudotime to use (i.e. a column name of object@pseudotime).
jitter
(Numeric) Distance to jitter cells before placing next to dendrogram. (Relative to 1, which is the distance between terminal segments).
jitter.push
(Numeric) Distance next to lines of dendrogram that should not include any cells.
Value
An URD object with cell locations added to object@tree$cell.layout.
farrellja/URD documentation built on June 17, 2020, 4:48 a.m.
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Description Usage Arguments Value
Description
This function is called automatically by buildTree.
Usage
1 | treeLayoutCells(object, pseudotime, jitter = 0.15, jitter.push = 0.05)
|
Arguments
object |
An URD object |
pseudotime |
(Character) Pseudotime to use (i.e. a column name of |
jitter |
(Numeric) Distance to jitter cells before placing next to dendrogram. (Relative to 1, which is the distance between terminal segments). |
jitter.push |
(Numeric) Distance next to lines of dendrogram that should not include any cells. |
Value
An URD object with cell locations added to object@tree$cell.layout.
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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