Description Usage Arguments Value
This reads and aggregates the molecule info file output by the 10X pathway
into reads per cell barcode for use in txCutoffPlot
. (This is
because it takes some time to read in this data, so many plots can be tried
with only having to read the data once.)
1 | txReadsPerCell(molecule.info.path)
|
molecule.info.path |
(Character) Path to the molecule_info.h5 file output by 10X. |
Returns a data.frame with columns "barcode" (2-bit encoded cell barcode), "reads", "unmapped_reads", and "nonconf_mapped_reads" (as per 10X documentation), and "total_reads", which is the sum of the 3 previous columns.
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