Files in fchen365/surf
Statistical Utility for RBP (RNA binding protein) Functions
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md
R/estimate.R
R/help.R
R/prepare.R
README.md
inst/CITATION
man/abs.max.Rd
man/addGeneTx.Rd
man/aggregateAUCbyCondition.Rd
man/annotateEvent.Rd
man/c_granges.Rd
man/calculateAUC.Rd
man/clusterByGroup.Rd
man/countLogicRle.Rd
man/daseq.Rd
man/daseqResults-class.Rd
man/daseqResults.Rd
man/diffAUC.Rd
man/drseq.Rd
man/drseqCount.Rd
man/drseqFilter.Rd
man/drseqFit.Rd
man/drseqResults-class.Rd
man/drseqResults.Rd
man/fa.plot.Rd
man/faseq.Rd
man/faseqCount.Rd
man/faseqFit.Rd
man/faseqInfer.Rd
man/faseqResults-class.Rd
man/faseqResults.Rd
man/fat.Rd
man/featureCounts.Rd
man/findAdjacentFeature.Rd
man/findBodyFeature.Rd
man/findNeighborFeature.Rd
man/genePartsList.Rd
man/getASName.Rd
man/getAUC.Rd
man/getControlSet.Rd
man/getEES.Rd
man/getESS.Rd
man/getEvent.Rd
man/getFeature.Rd
man/getIsoAS.Rd
man/getIsoPartsList.Rd
man/getMultiTxGene.Rd
man/getRankings.Rd
man/getTargetSet.Rd
man/heatmapAUC.Rd
man/import.Rd
man/inferredFeature.Rd
man/list_rbind.Rd
man/numberAS.Rd
man/parseEvent.Rd
man/plotDispFunc.Rd
man/prepDrseqAnno.Rd
man/sampleData.Rd
man/stream.Rd
man/surf-class.Rd
man/volcano.plot.Rd
surf.Rproj
tests/testthat.R
tests/testthat/test-setup.R
vignettes/drseq.annotation.event.gff2
vignettes/drseq.annotation.exon.gff2
vignettes/figures/0_pipeline.jpg
vignettes/figures/1_atr.jpg
vignettes/figures/2_feature.jpg
vignettes/figures/3_disperson.jpg
vignettes/figures/4_volcano.jpg
vignettes/results/intermediate1.rds
vignettes/results/intermediate2.rds
vignettes/results/intermediate3.rds
vignettes/results/intermediate4.rds
vignettes/surf.R
vignettes/surf.Rmd
vignettes/surf.html
vignettes/surf.md
