BAGEL_essential: Reference Core fitness essential genes

In francescojm/CRISPRcleanR: Unsupervised correction of gene independent cell responses to CRISPR-cas9 targeting

Reference Core fitness essential genes

Description

A list of reference core fitness essential genes assembled from multiple RNAi studies used as classification template by the BAGEL algorithm to call gene depletion significance [1].

Usage

data(BAGEL_essential)

Format

A vector of strings containing HGNC symbols of reference core fitness essential genes.

References

[1] BAGEL: a computational framework for identifying essential genes from pooled library screens. Traver Hart and Jason Moffat. BMC Bioinformatics, 2016 vol. 17 p. 164.

See Also

BAGEL_nonEssential

Examples

data(BAGEL_essential)
head(BAGEL_essential)

francescojm/CRISPRcleanR documentation built on April 30, 2023, 5:41 a.m.