BAGEL_nonEssential: Reference set of non essential genes
In francescojm/CRISPRcleanR: Unsupervised correction of gene independent cell responses to CRISPR-cas9 targeting
BAGEL_nonEssential R Documentation
Reference set of non essential genes
Description
A list of reference non essential genes assembled from multiple RNAi studies used as classification template
by the BAGEL algorithm to call gene depletion significance [1].
Usage
data(BAGEL_nonEssential)
Format
A vector of strings containing HGNC symbols of reference non essential genes.
References
[1] BAGEL: a computational framework for identifying essential genes from pooled library screens. Traver Hart and Jason Moffat. BMC Bioinformatics, 2016 vol. 17 p. 164.
See Also
BAGEL_essential
Examples
data(BAGEL_nonEssential)
head(BAGEL_nonEssential)
francescojm/CRISPRcleanR documentation built on April 30, 2023, 5:41 a.m.
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| BAGEL_nonEssential | R Documentation |
Reference set of non essential genes
Description
A list of reference non essential genes assembled from multiple RNAi studies used as classification template by the BAGEL algorithm to call gene depletion significance [1].
Usage
data(BAGEL_nonEssential)Format
A vector of strings containing HGNC symbols of reference non essential genes.
References
[1] BAGEL: a computational framework for identifying essential genes from pooled library screens. Traver Hart and Jason Moffat. BMC Bioinformatics, 2016 vol. 17 p. 164.
See Also
BAGEL_essential
Examples
data(BAGEL_nonEssential)
head(BAGEL_nonEssential)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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