ccr.sgRNAmeanFCs: Extract corrected logFC in vectorial format.
In francescojm/CRISPRcleanR: Unsupervised correction of gene independent cell responses to CRISPR-cas9 targeting
ccr.sgRNAmeanFCs R Documentation
Extract corrected logFC in vectorial format.
Description
This function takes as input a data frame containing the corrected logFC in the format generated by the ccr.GWclean function.
This is a utility function that runs automatically as part of the ccr.AnalysisPipeline.
Usage
ccr.sgRNAmeanFCs(
foldchanges
)
Arguments
foldchanges
A data frame with a "correctedFC" column storing the CN corrected logFC and row names equal to the sgRNA associated to the foldchages.
Value
A named vector containing the corrected logFC and names equal to the related sgRNAs.
Author(s)
Paolo Cremaschi (paolo.crmeaschi@fht.org)
See Also
ccr.AnalysisPipeline
ccr.GWclean
francescojm/CRISPRcleanR documentation built on April 30, 2023, 5:41 a.m.
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| ccr.sgRNAmeanFCs | R Documentation |
Extract corrected logFC in vectorial format.
Description
This function takes as input a data frame containing the corrected logFC in the format generated by the ccr.GWclean function.
This is a utility function that runs automatically as part of the ccr.AnalysisPipeline.
Usage
ccr.sgRNAmeanFCs(
foldchanges
)
Arguments
foldchanges |
A data frame with a "correctedFC" column storing the CN corrected logFC and row names equal to the sgRNA associated to the foldchages. |
Value
A named vector containing the corrected logFC and names equal to the related sgRNAs.
Author(s)
Paolo Cremaschi (paolo.crmeaschi@fht.org)
See Also
ccr.AnalysisPipeline
ccr.GWclean
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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