annotate-methods | Annotate Network |
annotateModules-methods | Annotate Network Modules |
buildCytoscapeGraph-methods | Build Cytoscape Graph |
build-methods | Build Network |
cluster-methods | Cluster Network |
df2tsv | Data Frame to TSV Convert a data frame (not including... |
extractFIs | Extract FIs From XML Document Extract FI gene pairs from an... |
extractProteinInfo | extract Protein Info Extract protein information including... |
fis2str | FIs to String Convert a FI data frame into a string according... |
fis-methods | Retrieve FI Network Data |
genes-methods | Retrieve Network Genes |
getPostXML | Get POST Query XML Response Make a POST request to a URL with... |
ggplot.net | ggplot Network Plot network edges and vertices using ggplot |
glioblastoma.maf | Glioblastoma MAF |
HotNet | HotNet Class |
layout.net | Layout ReactomeFINetwork Retrieve the coordinates for the... |
maf2genescores | NCI MAF to genescore |
modules-methods | Retrieve Network Module Data |
plot-methods | Plot Network Plot the interaction network. Layout methods are... |
queryAnnotateGeneSet-methods | Query Annotate Gene Set |
queryAnnotateModules-methods | Query Annotate FI Network Module Gene Set |
queryBuildNetwork-methods | Query Build Network |
queryCluster-methods | Query Cluster Functional Interaction Network |
queryEdge-methods | Query Edge |
queryFIsBetween-methods | Query FIs Between Genes |
queryFIs-methods | Query Functional Interactions |
queryHotNetAnalysis-methods | Query HotNet Analysis |
reactomefi | reactomefi. |
ReactomeFINetwork | ReactomeFINetwork Class |
ReactomeFIService | ReactomeFIService Class |
service-methods | Retrieve ReactomeFIService Object |
serviceURL-methods | RESTful API URL |
subnet-methods | Create HotNet ReactomeFI Network |
version-methods | Reactome FI Network Version |
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