queryCluster-methods: Query Cluster Functional Interaction Network
In funnell/reactomefi: Reactome FI network analysis tools
Description
Usage
Arguments
Value
Description
Query the RESTful API to cluster a FI network. The network
nodes (genes) and the network modules they belong to are
returned.
Usage
1
2
3
4
queryCluster(object, fis)
## S4 method for signature 'ReactomeFIService,data.frame'
queryCluster(object, fis)
Arguments
object
ReactomeFIService object.
fis
Data frame of functional interactions. Should
be two columns per row indicating the two nodes in the
interaction
Value
data.frame Each row contains the gene name and the module
id.
funnell/reactomefi documentation built on May 16, 2019, 4:05 p.m.
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Description Usage Arguments Value
Description
Query the RESTful API to cluster a FI network. The network nodes (genes) and the network modules they belong to are returned.
Usage
1 2 3 4 | queryCluster(object, fis)
## S4 method for signature 'ReactomeFIService,data.frame'
queryCluster(object, fis)
|
Arguments
object |
ReactomeFIService object. |
fis |
Data frame of functional interactions. Should be two columns per row indicating the two nodes in the interaction |
Value
data.frame Each row contains the gene name and the module id.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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