Description Usage Arguments Value
ggplot Network Plot network edges and vertices using ggplot
1 2 | ggplot.net(vertex.coords, edge.coords, colour.modules, node.alpha, edge.alpha,
indicate.linkers)
|
vertex.coords |
DataFrame containing vertex x,y coordinates, gene names, and optionally module labels. |
edge.coords |
DataFrame containing edge line end coordinates |
colour.modules |
Set to TRUE to colour nodes according to their module |
node.alpha |
Value between 0 and 1 indicating nodes' transparency |
edge.alpha |
Value between 0 and 1 indicating the edges' transparency |
indicate.linkers |
Set to TRUE to visualise linker nodes as a diamond |
ggplot ggplot object
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