Files in genomaths/MethylIT

Methylation Analysis Based on Signal Detection

CONDUCT.md MethylIT-manual.pdf NEWS.md README.md man/AICmodel.Rd man/AICquasiPoisson.Rd man/BICmodel.Rd man/Extract.Rd man/FisherTest.Rd man/GeneUpDownStream.Rd man/HD.Rd man/MethylIT.Rd man/PS.Rd man/betaBinPosteriors.Rd man/beta_bin_meth.Rd man/boltzman_factor.Rd man/coef.Rd man/countTest2.Rd man/cutpoint.Rd man/dmpClusters.Rd man/dmps.Rd man/dmrfinder.Rd man/ds.Rd man/estimateBayesianDivergence.Rd man/estimateBetaDist.Rd man/estimateCutPoint.Rd man/estimateDivergence.Rd man/estimateECDF.Rd man/estimateGLM.Rd man/estimateHellingerDiv.Rd man/estimateJDiv.Rd man/evaluateDIMPclass.Rd man/evaluateModel.Rd man/filterByCoverage.Rd man/filterGRange.Rd man/fitGGammaDist.Rd man/fitGammaDist.Rd man/fitLogNormDist.Rd man/getBaseMeansAndVariances.Rd man/getDIMPatGenes.Rd man/getDMGs.Rd man/getDMPatRegions.Rd man/getGEOSuppFiles.Rd man/getGRangesStat.Rd man/getPotentialDIMP.Rd man/ggamma.Rd man/gibb_entropy.Rd man/glmDataSet.Rd man/gmMean.Rd man/gof.Rd man/gofReport.Rd man/gunzip.Rd man/hdiv.Rd man/helmholtz_free_energy.Rd man/lapply.Rd man/lda_perf.Rd man/logit_perf.Rd man/machine_ent.Rd man/meth_levels.Rd man/mlCutpoint.Rd man/nonlinearFitDist.Rd man/pcaLDA.Rd man/pcaLda_perf.Rd man/pcaLogisticR.Rd man/pcaQDA.Rd man/pcaQda_perf.Rd man/pcalogit_perf.Rd man/pjob_split.Rd man/poolFromGRlist.Rd man/predict.LogisticR.Rd man/predict.Rd man/predict.cdfMODEL.Rd man/predict.ldaDMP.Rd man/predict.qdaDMP.Rd man/predictDIMPclass.Rd man/print.glmDataSet.Rd man/print.mlDMP.Rd man/pweibull3P.Rd man/qda_perf.Rd man/rcounts.Rd man/readCounts2GRangesList.Rd man/selectDIMP.Rd man/simpleCutPoint.Rd man/slidingGRegions.Rd man/sortBySeqnameAndStart.Rd man/uniqueGRanges.Rd man/uniqueGRfilterByCov.Rd man/unlist.Rd man/validateClass.Rd man/weibull3P.Rd