ASCN.ff: Allele-Specific Copy Number estimation, from a RDS file.

In gustaveroussy/EaCoN: EaCoN : Easy Copy Number !

Description

This function is just a wrapper to any of the copy number estimation functions (ASCN.ASCAT(), ASCN.FACETS() and ASCN.SEQUENZA()), starting from a RDS file rather than a data object.

Usage

  ASCN.ff(RDS.file = NULL, ...)

Arguments

RDS.file	A RDS file generated with one of the segmentation functions (Segment.ASCAT(), Segment.FACETS()), or their corresponding ".ff" or ".ff.Batch" wrappers.
...	Any parameter to the copy number estimation method.

Author(s)

Bastien Job

gustaveroussy/EaCoN documentation built on Oct. 20, 2021, 2:41 a.m.