colData-set-scNMFSet-ANY-method: Cell annotation assignment
In hjunwoo/ccfindR: Cancer Clone Finder

Description Usage Arguments Value Examples

Cell annotation assignment

1 2	## S4 replacement method for signature 'scNMFSet,ANY' colData(x) <- value

`x`	Object containing cell annotation
`value`	DataFrame to be substituted

Updated column annotation

library(S4Vectors)
x <- matrix(rpois(n=12,lambda=3),4,3)
rownames(x) <- seq_len(4)
colnames(x) <- c('a','b','c')
s <- scNMFSet(count=x,rowData=seq_len(4),colData=c('a','b','c'))
cols <- DataFrame(tissue=c('tissue1','tissue1','tissue2'))
rownames(cols) <- c('a','b','c')
colData(s) <- cols
s