ranks-set-scNMFSet-method: Modify ranks

In hjunwoo/ccfindR: Cancer Clone Finder

Description

Replace ranks slot of scNMFSet object

Usage

## S4 replacement method for signature 'scNMFSet'
ranks(object) <- value

Arguments

object	Object of class scNMFSet
value	Rank values (vector) to be substituted

Value

Input object with updated ranks

Examples

s <- scNMFSet(count=matrix(rpois(n=12,lambda=3),4,3))
s <- vb_factorize(s, ranks=seq(2,3))
ranks(s) <- c('two','three')
ranks(s)

hjunwoo/ccfindR documentation built on Oct. 4, 2019, 10:31 a.m.