draw_barplot | R Documentation |
This produces a barplot of the dichotomized gene expression counts into two or three categories based on custom defined percentiles.
draw_barplot( object, assay_name, x_spec, facet_var = NULL, fill_var = NULL, percentiles = c(1/3, 2/3) )
object |
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assay_name |
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x_spec |
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facet_var |
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fill_var |
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percentiles |
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The ggplot
barplot.
object <- hermes_data g <- genes(object) draw_barplot( object, assay_name = "counts", x_spec = gene_spec(g[1]), facet_var = "SEX", fill_var = "AGE18" ) draw_barplot( object, assay_name = "counts", x_spec = gene_spec(g[1:3], colMedians, "Median"), facet_var = "SEX", fill_var = "AGE18" ) draw_barplot( object, assay_name = "counts", x_spec = gene_spec(g[1:3], colMeans, "Mean"), facet_var = "SEX", fill_var = "AGE18", percentiles = c(0.1, 0.9) )
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