expression_set: Example 'ExpressionSet' Data

In insightsengineering/hermes: Preprocessing, analyzing, and reporting of RNA-seq data

Example ExpressionSet Data

Description

This example data can be used to try out conversion of a Biobase::ExpressionSet object into a HermesData object.

Usage

expression_set

Format

A Biobase::ExpressionSet object with 20 samples covering 5085 features (Entrez gene IDs).

Source

This is an artificial dataset designed to resemble real data.

See Also

• SummarizedExperiment::makeSummarizedExperimentFromExpressionSet() to convert into a SummarizedExperiment::SummarizedExperiment.

• summarized_experiment which contains similar data already as a SummarizedExperiment::SummarizedExperiment.

insightsengineering/hermes documentation built on March 11, 2024, 11:04 p.m.