draw_heatmap | R Documentation |
This produces a heatmap of the chosen assay and groups by various sample variables.
draw_heatmap( object, assay_name, color_extremes = c(0.01, 0.99), col_data_annotation = NULL, ... )
object |
( |
assay_name |
( |
color_extremes |
( |
col_data_annotation |
( |
... |
additional arguments to pass to |
The ComplexHeatmap::Heatmap
heatmap
result <- hermes_data %>% normalize(methods = "voom") %>% add_quality_flags() %>% filter(what = "genes") draw_heatmap( object = result[1:10, ], assay_name = "counts", col_data_annotation = "COUNTRY" ) draw_heatmap( object = result[1:10, ], assay_name = "counts", color_extremes = c(0.001, 0.999), col_data_annotation = "AGEGRP" )
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