extract_non_redundant: Create a accnet or mash object with the representatives...
In irycisBioinfo/PATO: Pangenome Analysis Toolkit

extract_non_redundant

R Documentation

Create a accnet or mash object with the representatives members of each cluster

This function creates a non-redundant representation of the input object (accnet or mash).

extract_non_redundant(data, nr_list)

`data`	accnet or mash object
`nr_list`	data.frame with two columns (Source, Target) or nr_list object created with non_redundant() function. For data.frame, each first member of the cluster will be selected as representative. In the caso of nr_list object. The member with higher centrality will be selected as representative.